Isolation and propagation of influenza virus from Influenza Like Illness (ILI) clinical sample is essential for the surveillance of circulating virus, such as antigenic and genetic analyses, antiviral sensitivity surveillance, as well as annual influenza vaccine selection. Madin-Darby canine kidney (MDCK) cell is conventionally used for virus isolation in public health laboratories. Throat swap samples of Influenza like Illness (ILI) were collected from two sentinel hospitals and screened seasonal influenza by real-time reverse transcription polymerase chain reaction (RT–PCR). H3N2 positive samples were performed virus isolation in MDCK cells. Samples were stored under different conditions before inoculation, 1-2 days at 2-8°C, 4-5 day or 8-9 days at 2-8°C, and no less than two months at -80°C. The results showed that long term (>2 month) -80°C storage of clinical samples (15.12%) had significantly lower virus isolation rate compare to short term (1-2 days and 4-9 days) under 2-8°C storage (88.37% for 1-2 days and 52.33% for 4-9 days). For those samples stored at 4°C, the shorter of the storage time, the better of sample quality and virus activity could be obtained, resulting in higher isolation rate. This study provides evidence for influenza surveillance and sample quality control.
Published in | International Journal of Microbiology and Biotechnology (Volume 7, Issue 1) |
DOI | 10.11648/j.ijmb.20220701.14 |
Page(s) | 31-36 |
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Copyright © The Author(s), 2022. Published by Science Publishing Group |
Influenza, Virus Isolation, Sample Quality, Sample Storage Condition
[1] | WHO Writing Group, Ampofo, W. K., Baylor, N., Cobey, S., Cox, N. J., Daves, S., Edwards, S., et. al. (2012) Improving influenza vaccine virus selection: report of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14-16 June 2010, Influenza Other Respir Viruses 6, 142-152, e141-145. |
[2] | Stohr, K., Bucher, D., Colgate, T., and Wood, J. (2012) Influenza virus surveillance, vaccine strain selection, and manufacture, Methods Mol Biol 865, 147-162. |
[3] | Stohr, K. (2002) Influenza--WHO cares, Lancet Infect Dis 2, 517. |
[4] | Russell, C. A., Jones, T. C., Barr, I. G., Cox, N. J., Garten, R. J., Gregory, V., et. al. (2008) Influenza vaccine strain selection and recent studies on the global migration of seasonal influenza viruses, Vaccine 26 Suppl 4, D31-34. |
[5] | Petric, M., Comanor, L., and Petti, C. A. (2006) Role of the laboratory in diagnosis of influenza during seasonal epidemics and potential pandemics, J Infect Dis 194 Suppl 2, S98-110. |
[6] | Minor, P. D., Engelhardt, O. G., Wood, J. M., Robertson, J. S., Blayer, S., Colegate, T., et. al. (2009) Current challenges in implementing cell-derived influenza vaccines: implications for production and regulation, July 2007, NIBSC, Potters Bar, UK, Vaccine 27, 2907-2913. |
[7] | Minor, P. D. (2010) Vaccines against seasonal and pandemic influenza and the implications of changes in substrates for virus production, Clin Infect Dis 50, 560-565. |
[8] | Giria, M. T., Rebelo de Andrade, H., Santos, L. A., Correia, V. M., Pedro, S. V., and Santos, M. A. (2012) Genomic signatures and antiviral drug susceptibility profile of A (H1N1) pdm09, J Clin Virol 53, 140-144. |
[9] | Richard, M., Ferraris, O., Erny, A., Barthelemy, M., Traversier, A., Sabatier, M., et. al. (2011) Combinatorial effect of two framework mutations (E119V and I222L) in the neuraminidase active site of H3N2 influenza virus on resistance to oseltamivir, Antimicrob Agents Chemother 55, 2942-2952. |
[10] | Vanderlinden, E., Goktas, F., Cesur, Z., Froeyen, M., Reed, M. L., Russell, C. J., et. al. (2010) Novel inhibitors of influenza virus fusion: structure-activity relationship and interaction with the viral hemagglutinin, J Virol 84, 4277-4288. |
[11] | Zhirnov, O. P., Vorobjeva, I. V., Saphonova, O. A., Poyarkov, S. V., Ovcharenko, A. V., Anhlan, D., et. al. (2009) Structural and evolutionary characteristics of HA, NA, NS and M genes of clinical influenza A/H3N2 viruses passaged in human and canine cells, J Clin Virol 45, 322-333. |
[12] | Connor, R. J., Kawaoka, Y., Webster, R. G., and Paulson, J. C. (1994) Receptor specificity in human, avian, and equine H2 and H3 influenza virus isolates, Virology 205, 17-23. |
[13] | Rogers, G. N., and Paulson, J. C. (1983) Receptor determinants of human and animal influenza virus isolates: differences in receptor specificity of the H3 hemagglutinin based on species of origin, Virology 127, 361-373. |
[14] | Meguro, H., Bryant, J. D., Torrence, A. E., and Wright, P. F. (1979) Canine kidney cell line for isolation of respiratory viruses, J Clin Microbiol 9, 175-179. |
[15] | Tobita, K. (1975) Permanent canine kidney (MDCK) cells for isolation and plaque assay of influenza B viruses, Med Microbiol Immunol 162, 23-27. |
[16] | Tobita, K., Sugiura, A., Enomote, C., and Furuyama, M. (1975) Plaque assay and primary isolation of influenza A viruses in an established line of canine kidney cells (MDCK) in the presence of trypsin, Med Microbiol Immunol 162, 9-14. |
[17] | Ito, T., Suzuki, Y., Takada, A., Kawamoto, A., Otsuki, K., Masuda, H., et. al. (1997) Differences in sialic acid-galactose linkages in the chicken egg amnion and allantois influence human influenza virus receptor specificity and variant selection, J Virol 71, 3357-3362. |
[18] | Bai, H., Zhao, J., Ma, C., Wei, H., Li, X., Fang, Q., et. al. (2021) Impact of RNA degradation on influenza diagnosis in the surveillance system, Diagn Microbiol Infect Dis. 100, 115388. |
[19] | Meerhoff, T. J., Meijer, A., Paget, W. J., and Eiss. (2004) Methods for sentinel virological surveillance of influenza in Europe - an 18-country survey, Euro Surveill 9, 34-38. |
[20] | Wang, X., Zoueva, O., Zhao, J., Ye, Z., and Hewlett, I. (2011) Stability and infectivity of novel pandemic influenza A (H1N1) virus in blood-derived matrices under different storage conditions, BMC Infect Dis 11, 354. |
[21] | Organization, W. H. (2011) Manual for the laboratory diagnosis and virological surveillance of influenza. |
[22] | Tamura, D., Nguyen, H. T., Sleeman, K., Levine, M., Mishin, V. P., Yang, H., et. al. (2013) Cell culture-selected substitutions in influenza A (H3N2) neuraminidase affect drug susceptibility assessment, Antimicrob Agents Chemother 57, 6141-6146. |
[23] | Chambers, B. S., Li, Y., Hodinka, R. L., and Hensley, S. E. (2014) Recent H3N2 influenza virus clinical isolates rapidly acquire hemagglutinin or neuraminidase mutations when propagated for antigenic analyses, J Virol 88, 10986-10989. |
[24] | Donis, R. O., Influenza Cell Culture Working, Group, Davis, C. T., Foust, A., Hossain, M. J., Johnson, A. (2014) Performance characteristics of qualified cell lines for isolation and propagation of influenza viruses for vaccine manufacturing. Vaccine 32, 6583-90. |
[25] | Lin, S. C., Kappes, M. A., Chen, M. C., Lin, C. C., and Wang, T. T. (2017) Distinct susceptibility and applicability of MDCK derivatives for influenza virus research, PLoS One 12, e0172299. |
[26] | Matrosovich, M., Matrosovich, T., Carr, J., Roberts, N. A., and Klenk, H. D. (2003) Overexpression of the alpha-2,6-sialyltransferase in MDCK cells increases influenza virus sensitivity to neuraminidase inhibitors, J Virol 77, 8418-8425. |
[27] | Lugovtsev, V. Y., Melnyk, D., and Weir, J. P. (2013) Heterogeneity of the MDCK cell line and its applicability for influenza virus research, PLoS One 8, e75014. |
[28] | Oh, D. Y., Barr, I. G., Mosse, J. A., and Laurie, K. L. (2008) MDCK-SIAT1 cells show improved isolation rates for recent human influenza viruses compared to conventional MDCK cells, J Clin Microbiol 46, 2189-2194. |
[29] | Klimov, A., Balish, A., Veguilla, V., Sun, H., Schiffer, J., Lu, X., Katz, J. M., and Hancock, K. (2012) Influenza virus titration, antigenic characterization, and serological methods for antibody detection, Methods Mol Biol 865, 25-51. |
[30] | Hossain, M. J., Perez, S., Guo, Z., Chen, L. M., and Donis, R. O. (2010) Establishment and characterization of a Madin-Darby canine kidney reporter cell line for influenza A virus assays, J Clin Microbiol 48, 2515-2523. |
[31] | Tsuji, S. (1996) Molecular cloning and functional analysis of sialyltransferases, J Biochem 120, 1-13. |
[32] | Weinstein, J., de Souza-e-Silva, U., and Paulson, J. C. (1982) Purification of a Gal beta 1 to 4GlcNAc alpha 2 to 6 sialyltransferase and a Gal beta 1 to 3 (4) GlcNAc alpha 2 to 3 sialyltransferase to homogeneity from rat liver, J Biol Chem 257, 13835-13844. |
[33] | Hatakeyama, S., Sakai-Tagawa, Y., Kiso, M., Goto, H., Kawakami, C., Mitamura, K., et. al. (2005) Enhanced expression of an alpha2,6-linked sialic acid on MDCK cells improves isolation of human influenza viruses and evaluation of their sensitivity to a neuraminidase inhibitor, J Clin Microbiol 43, 4139-4146. |
APA Style
Hongyan Bai, Jiachen Zhao, Chunna Ma, Hejiang Wei, Xiyan Li, et al. (2022). Virus Isolation and Propagation from H3N2 Influenza Infected Human Clinical Samples Under Distinct Sample Storage Conditions. International Journal of Microbiology and Biotechnology, 7(1), 31-36. https://doi.org/10.11648/j.ijmb.20220701.14
ACS Style
Hongyan Bai; Jiachen Zhao; Chunna Ma; Hejiang Wei; Xiyan Li, et al. Virus Isolation and Propagation from H3N2 Influenza Infected Human Clinical Samples Under Distinct Sample Storage Conditions. Int. J. Microbiol. Biotechnol. 2022, 7(1), 31-36. doi: 10.11648/j.ijmb.20220701.14
AMA Style
Hongyan Bai, Jiachen Zhao, Chunna Ma, Hejiang Wei, Xiyan Li, et al. Virus Isolation and Propagation from H3N2 Influenza Infected Human Clinical Samples Under Distinct Sample Storage Conditions. Int J Microbiol Biotechnol. 2022;7(1):31-36. doi: 10.11648/j.ijmb.20220701.14
@article{10.11648/j.ijmb.20220701.14, author = {Hongyan Bai and Jiachen Zhao and Chunna Ma and Hejiang Wei and Xiyan Li and Qiongqiong Fang and Peng Yang and Quanyi Wang and Dayan Wang and Li Xin}, title = {Virus Isolation and Propagation from H3N2 Influenza Infected Human Clinical Samples Under Distinct Sample Storage Conditions}, journal = {International Journal of Microbiology and Biotechnology}, volume = {7}, number = {1}, pages = {31-36}, doi = {10.11648/j.ijmb.20220701.14}, url = {https://doi.org/10.11648/j.ijmb.20220701.14}, eprint = {https://article.sciencepublishinggroup.com/pdf/10.11648.j.ijmb.20220701.14}, abstract = {Isolation and propagation of influenza virus from Influenza Like Illness (ILI) clinical sample is essential for the surveillance of circulating virus, such as antigenic and genetic analyses, antiviral sensitivity surveillance, as well as annual influenza vaccine selection. Madin-Darby canine kidney (MDCK) cell is conventionally used for virus isolation in public health laboratories. Throat swap samples of Influenza like Illness (ILI) were collected from two sentinel hospitals and screened seasonal influenza by real-time reverse transcription polymerase chain reaction (RT–PCR). H3N2 positive samples were performed virus isolation in MDCK cells. Samples were stored under different conditions before inoculation, 1-2 days at 2-8°C, 4-5 day or 8-9 days at 2-8°C, and no less than two months at -80°C. The results showed that long term (>2 month) -80°C storage of clinical samples (15.12%) had significantly lower virus isolation rate compare to short term (1-2 days and 4-9 days) under 2-8°C storage (88.37% for 1-2 days and 52.33% for 4-9 days). For those samples stored at 4°C, the shorter of the storage time, the better of sample quality and virus activity could be obtained, resulting in higher isolation rate. This study provides evidence for influenza surveillance and sample quality control.}, year = {2022} }
TY - JOUR T1 - Virus Isolation and Propagation from H3N2 Influenza Infected Human Clinical Samples Under Distinct Sample Storage Conditions AU - Hongyan Bai AU - Jiachen Zhao AU - Chunna Ma AU - Hejiang Wei AU - Xiyan Li AU - Qiongqiong Fang AU - Peng Yang AU - Quanyi Wang AU - Dayan Wang AU - Li Xin Y1 - 2022/03/09 PY - 2022 N1 - https://doi.org/10.11648/j.ijmb.20220701.14 DO - 10.11648/j.ijmb.20220701.14 T2 - International Journal of Microbiology and Biotechnology JF - International Journal of Microbiology and Biotechnology JO - International Journal of Microbiology and Biotechnology SP - 31 EP - 36 PB - Science Publishing Group SN - 2578-9686 UR - https://doi.org/10.11648/j.ijmb.20220701.14 AB - Isolation and propagation of influenza virus from Influenza Like Illness (ILI) clinical sample is essential for the surveillance of circulating virus, such as antigenic and genetic analyses, antiviral sensitivity surveillance, as well as annual influenza vaccine selection. Madin-Darby canine kidney (MDCK) cell is conventionally used for virus isolation in public health laboratories. Throat swap samples of Influenza like Illness (ILI) were collected from two sentinel hospitals and screened seasonal influenza by real-time reverse transcription polymerase chain reaction (RT–PCR). H3N2 positive samples were performed virus isolation in MDCK cells. Samples were stored under different conditions before inoculation, 1-2 days at 2-8°C, 4-5 day or 8-9 days at 2-8°C, and no less than two months at -80°C. The results showed that long term (>2 month) -80°C storage of clinical samples (15.12%) had significantly lower virus isolation rate compare to short term (1-2 days and 4-9 days) under 2-8°C storage (88.37% for 1-2 days and 52.33% for 4-9 days). For those samples stored at 4°C, the shorter of the storage time, the better of sample quality and virus activity could be obtained, resulting in higher isolation rate. This study provides evidence for influenza surveillance and sample quality control. VL - 7 IS - 1 ER -